Search results for "genetics [Transcriptome]"

showing 10 items of 3033 documents

Perturbations of the classical Lotka-Volterra system by behavioral sequences

1995

The complexity and the variability of parameters occurring in ecological dynamical systems imply a large number of equations.

PhysicsPhilosophyPhilosophy of biologyDynamical systems theoryApplied MathematicsQuantitative Biology::Populations and EvolutionGeneral MedicineStatistical physicsPerturbation theoryGeneral Agricultural and Biological SciencesDynamical systemGeneral Biochemistry Genetics and Molecular BiologyGeneral Environmental ScienceActa Biotheoretica
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self-consistent approach to describe unit-cell-parameter and volume variations with pressure and temperature

2021

A method is presented for the self-consistent description of the variations of unit-cell parameters of crystals with pressure and temperature.

PhysicsPolynomialequations of state; unit-cell parameters; EosFit; pressureequations of stateMathematical analysis02 engineering and technologySelf consistentTriclinic crystal system010502 geochemistry & geophysics021001 nanoscience & nanotechnologyResearch Papers01 natural sciencesGeneral Biochemistry Genetics and Molecular BiologyThermal expansionpressureVolume (thermodynamics)unit-cell parametersEosFitCompressibility0210 nano-technologyUnit (ring theory)0105 earth and related environmental sciencesMonoclinic crystal system
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Real-time measurements of spontaneous breathers and rogue wave events in optical fibre modulation instability

2016

Modulation instability is a fundamental process of nonlinear science, leading to the unstable breakup of a constant amplitude solution of a physical system. There has been particular interest in studying modulation instability in the cubic nonlinear Schrödinger equation, a generic model for a host of nonlinear systems including superfluids, fibre optics, plasmas and Bose–Einstein condensates. Modulation instability is also a significant area of study in the context of understanding the emergence of high amplitude events that satisfy rogue wave statistical criteria. Here, exploiting advances in ultrafast optical metrology, we perform real-time measurements in an optical fibre system of the u…

Physics[PHYS.PHYS.PHYS-OPTICS]Physics [physics]/Physics [physics]/Optics [physics.optics]MultidisciplinaryBreatherScienceQGeneral Physics and AstronomyContext (language use)General Chemistry01 natural sciencesInstability114 Physical sciencesGeneral Biochemistry Genetics and Molecular BiologyArticle010309 opticsNonlinear systemsymbols.namesakeModulational instabilityAmplitude0103 physical sciencessymbolsStatistical physicsRogue wave010306 general physicsNonlinear Schrödinger equation
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Acoustic dynamics of network-forming glasses at mesoscopic wavelengths

2013

The lack of long-range structural order in amorphous solids induces well known thermodynamic anomalies, which are the manifestation of distinct peculiarities in the vibrational spectrum. Although the impact of such anomalies vanishes in the long wavelength, elastic continuum limit, it dominates at length scales comparable to interatomic distances, implying an intermediate transition regime still poorly understood. Here we report a study of such mesoscopic domains by means of a broadband version of picosecond photo-acoustics, developed to coherently generate and detect hypersonic sound waves in the sub-THz region with unprecedented sampling efficiency. We identify a temperature-dependent fra…

Physics::OpticsGeneral Physics and Astronomy02 engineering and technologyBioinformatics01 natural sciencesArticleGeneral Biochemistry Genetics and Molecular BiologyOpticsFractal0103 physical sciencesBroadband010306 general physicsPhysicsMesoscopic physicsMultidisciplinarybusiness.industryAttenuationDynamics (mechanics)General Chemistry021001 nanoscience & nanotechnologyMaterials sciencePhysical sciencesWavelengthPicosecond0210 nano-technologybusiness
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Establishment of a pulmonary epithelial barrier on biodegradable poly-L-lactic-acid membranes

2019

Development of biocompatible and functional scaffolds for tissue engineering is a major challenge, especially for development of polarised epithelia that are critical structures in tissue homeostasis. Different in vitro models of the lung epithelial barrier have been characterized using non-degradable polyethylene terephthalate membranes which limits their uses for tissue engineering. Although poly-L-lactic acid (PLLA) membranes are biodegradable, those prepared via conventional Diffusion Induced Phase Separation (DIPS) lack open-porous geometry and show limited permeability compromising their use for epithelial barrier studies. Here we used PLLA membranes prepared via a modification of the…

PhysiologyCell MembranesCell Culture TechniquesBiocompatible Materials02 engineering and technologyEpitheliumTissue engineeringAnimal CellsAbsorbable ImplantsMaterials TestingElectric ImpedanceMedicine and Health SciencesLungTissue homeostasisBarrier functionStaining0303 health sciencesMultidisciplinaryTissue ScaffoldsTight junctionPolyethylene TerephthalatesChemistryQRCell Staining021001 nanoscience & nanotechnologyMembrane StainingElectrophysiologyMembranePhysical SciencesMedicineCytokinesBiological CulturesCellular Structures and OrganellesJunctional ComplexesCellular TypesAnatomy0210 nano-technologyResearch ArticleCell PhysiologySciencePolyestersMaterials ScienceMaterial PropertiesResearch and Analysis MethodsMembrane PotentialPermeabilityCell LineTight Junctions03 medical and health sciencesCell AdhesionHumans030304 developmental biologyBiochemistry Genetics and Molecular Biology (all)Tissue EngineeringBiology and Life SciencesEpithelial CellsMembranes ArtificialCell BiologyCell CulturesBiological TissueAgricultural and Biological Sciences (all)Specimen Preparation and TreatmentCell culturePermeability (electromagnetism)BiophysicsCytokine secretionPLOS ONE
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Identification of the Weevil immune genes and their expression in the bacteriome tissue

2008

Abstract Background Persistent infections with mutualistic intracellular bacteria (endosymbionts) are well represented in insects and are considered to be a driving force in evolution. However, while pathogenic relationships have been well studied over the last decades very little is known about the recognition of the endosymbionts by the host immune system and the mechanism that limits their infection to the bacteria-bearing host tissue (the bacteriome). Results To study bacteriome immune specificity, we first identified immune-relevant genes of the weevil Sitophilus zeamais by using suppressive subtractive hybridization (SSH) and then analyzed their full-length coding sequences obtained b…

PhysiologyPlant Scienceprotéines et peptides de signalisation intracellulaireStructural BiologyGene expressionlcsh:QH301-705.5Genetics0303 health sciencesAgricultural and Biological Sciences(all)EndosymbiosisReverse Transcriptase Polymerase Chain ReactionMicrobiology and ParasitologyIntracellular Signaling Peptides and ProteinsMicrobiologie et ParasitologielarveLarva1-1-1 Article périodique à comité de lectureInsect ProteinsGeneral Agricultural and Biological SciencesResearch ArticleBiotechnologyexpression géniquecharanconMolecular Sequence DatamuramidaseBiologyGeneral Biochemistry Genetics and Molecular BiologyMicrobiology03 medical and health sciencesAposymbioticcurculionidaeImmune systemEscherichia coliAnimalsGeneEcology Evolution Behavior and SystematicsAlphaproteobacteria030304 developmental biologyBiochemistry Genetics and Molecular Biology(all)030306 microbiologyTOLLIPIntracellular parasitefungiBacteriomeCell Biologybiochemical phenomena metabolism and nutritionGene Expression Regulationlcsh:Biology (General)WeevilsbacteriaCarrier ProteinsAntimicrobial Cationic Peptides[SDV.EE.IEO]Life Sciences [q-bio]/Ecology environment/SymbiosisDevelopmental BiologyBMC Biology
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Physostigmine and Neuromuscular Transmission

1993

Single channel studies carried out in cultured rat myoballs and cultured hippocampal neurons, and ion flux studies performed on Torpedo electrocyte membrane vesicles, showed that physostigmine (Phy), a well-established acetylcholinesterase inhibitor, interacts directly with nicotinic acetylcholine receptors (nAChR). Low concentrations (0.1 microM) of Phy activate the receptor integral channel, whereas higher concentrations blocked the channel in its opened state. In contrast to channel activation by acetylcholine (ACh) and classical cholinergic agonists, however, Phy was capable of activating the nAChR channel even when the ACh binding sites were blocked by competitive antagonists, such as …

PhysostigmineMolecular Sequence DataNeuromuscular JunctionNeuromuscular transmissionIn Vitro TechniquesReceptors NicotinicTorpedoHippocampusSynaptic TransmissionGeneral Biochemistry Genetics and Molecular BiologyNeuromuscular junctionHistory and Philosophy of SciencemedicineAnimalsAmino Acid SequencePatch clampBinding siteCells CulturedAcetylcholine receptorBinding SitesChemistryGeneral NeuroscienceAcetylcholineRatsQuaternary Ammonium CompoundsNicotinic agonistmedicine.anatomical_structureBiophysicsCholinergicIon Channel GatingNeuroscienceAcetylcholinemedicine.drugAnnals of the New York Academy of Sciences
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Globally defining the effects of mutations in a picornavirus capsid

2021

The capsids of non-enveloped viruses are highly multimeric and multifunctional protein assemblies that play key roles in viral biology and pathogenesis. Despite their importance, a comprehensive understanding of how mutations affect viral fitness across different structural and functional attributes of the capsid is lacking. To address this limitation, we globally define the effects of mutations across the capsid of a human picornavirus. Using this resource, we identify structural and sequence determinants that accurately predict mutational fitness effects, refine evolutionary analyses, and define the sequence specificity of key capsid-encoded motifs. Furthermore, capitalizing on the derive…

PicornavirusViral proteinQH301-705.5Sciencevirusesmedicine.medical_treatmentPicornaviridaeComputational biologymedicine.disease_causeGenomeGeneral Biochemistry Genetics and Molecular BiologyVirusImmune systemcapsidmedicineSingle amino acidBiology (General)GeneTropismHost proteinGeneticsEvolutionary BiologyMicrobiology and Infectious DiseaseMutationmutational fitness effectsProteaseGeneral Immunology and MicrobiologybiologyGeneral NeuroscienceQRviral proteaseGeneral Medicinebiochemical phenomena metabolism and nutritionbiology.organism_classificationViruspicornavirusViral proteaseCapsidMutationMedicineCapsid ProteinsHuman genomeDeep mutational scanningResearch ArticleHuman
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Subcellular distribution of choline acetyltransferase by immunogold electron microscopy in non-neuronal cells: Placenta, airways and murine embryonic…

2012

Abstract Aims Acetylcholine is synthesized in more or less all mammalian cells. However, little is known about the subcellular location of acetylcholine synthesis. Therefore, in the present experiments the subcellular location of the synthesizing enzyme choline acetyltransferase (ChAT) was investigated by anti-ChAT immunogold electron microscopy in human placenta and airways as well as in a murine embryonic stem cell line (CGR8 cell line). Main methods Human tissue was obtained as so-called surplus tissue (after delivery/surgical removal because of lung tumor); the CGR8 stem cell line was cultured under standard conditions. For human tissue a monoclonal mouse anti-ChAT antibody (ab) was use…

PlacentaeducationBronchiRespiratory MucosaBiologyGeneral Biochemistry Genetics and Molecular BiologyCell LineCholine O-AcetyltransferaseCell membraneMicePregnancyCaveolaeMacrophages Alveolarmental disordersmedicineAnimalsHumansGeneral Pharmacology Toxicology and PharmaceuticsNuclear membraneCells CulturedEmbryonic Stem Cellshealth care economics and organizationsEpithelial CellsGeneral MedicineImmunogold labellingImmunohistochemistryCholine acetyltransferaseMolecular biologyCellular StructureshumanitiesTrophoblastsCell biologyMicroscopy ElectronCytosolCell nucleusmedicine.anatomical_structureCell cultureFemaleLife Sciences
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Root vacuolar sequestration and suberization are prominent responses of Pistacia spp. rootstocks during salinity stress

2021

Abstract Understanding the mechanisms of stress tolerance in diverse species is needed to enhance crop performance under conditions such as high salinity. Plant roots, in particular in grafted agricultural crops, can function as a boundary against external stresses in order to maintain plant fitness. However, limited information exists for salinity stress responses of woody species and their rootstocks. Pistachio (Pistacia spp.) is a tree nut crop with relatively high salinity tolerance as well as high genetic heterogeneity. In this study, we used a microscopy‐based approach to investigate the cellular and structural responses to salinity stress in the roots of two pistachio rootstocks, Pis…

Plant ScienceBiologyBiochemistry Genetics and Molecular Biology (miscellaneous)salinity tolerancePistacia integerrimasuberizationSuberinExodermispistachio rootstockEcology Evolution Behavior and Systematicsvacuolar sequestrationEcologyPistaciaexodermisfungiBotanyXylemfood and beveragesbiology.organism_classificationendodermisSettore AGR/03 - Arboricoltura Generale E Coltivazioni ArboreeSalinityHorticultureQK1-989EndodermisRootstockendodermis exodermis pistachio rootstock salinity tolerance suberization vacuolar sequestrationPlant Direct
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